Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827359.1_cds_XP_016503051.1_16629
CDS Infomation

[gene=LOC107821154] [db_xref=GeneID:107821154] [protein=ruBisCO large subunit-binding protein subunit alpha-like] [protein_id=XP_016503051.1] [location=complement(join(3660..3947,4699..5150,5528..5834,6006..6151,6248..6455,6615..6736,7359..7548,7718..7774))] [gbkey=CDS]
Sequence

ATGGCATCTGCAAATACGATCTCCACTGGCTCAATCATATCCTTTTCATCTAAACAGGTG
GGTTTGAAGGGCACAAGGGTGAACCAATTGCAGGGACAGAAATTCAACAATAACAAGGCT
TCAAAGAGTCGGTTAGTAGTAAGGGCAAATGCTAAAGAAATCGCATATGACCAGAAATCA
AGAAGTGCCCTTCAGGCTGGTATTGATAAGCTCGTTGATGTTGTTGGTCTCACTCTTGGT
CCTAAGGGGAGGAATGTGGTTTTAGATGACTATGATACCCCGAAGGTGGTTAATGATGGA
GTCACAATTGCTCGAGCCATAGAGCTACCTGATGCTATGGAAAATGCAGGTGCCGCCCTT
ATCAGAGAGGTTGCAAGCCTAACCAATGATTCTGCTGGTGATGGGACAACAACTGCATCA
GTTCTTGCCAGGGAAATCATTAAACGTGGTCTATTAAGTGTTACATCTGGTGCAAATCCA
GTGTCTCTGAAGAAGGGCATCGACAAAACTGTAAATGTTTTAATTGAAATGCTAGAAAGG
AGGGCTAGGCCTGTTAAAGGTCGTGATGACATCAAAGCTATTGCTTCTATCTCTGCTGGA
AATGATGATGACATTGGTACCATGATCGCTGATGCAATTGACAAAGTTGGTCCTGATGGT
GTTCTAACGATCGAGTCATCCTCTTCCTTTGAAACAACTGTTCATGTTGAAGAGGGAATG
GAGATTGATAAGGGATATATCTCCCCACAATTCATGACCAACCAGGAGAAATTAATTGTT
GAATTTGAGAATGCTAGAGTGCTGGTTACAGATCAGGAGATTTCAGCAATCAAGGATATT
ATGCCCCTCTTGGAGAAGTCAACTGAATTACGAGCCCCTCTGCTCATTATTGCTGGAGAC
GTAACTGGAGAAGCTTTGGCTACTCTTGTTGTGAACAAGCTGCGAGGTGTACTGAACGTT
GCTGCCATCAGAGCACCTGGTTTTGGGCAAAGGAGGAAAGCTCTTCTCCAAGATATTGCC
ATTGTAACAGGAGCAGAGTACCAGGCTACTGAATTGGGTATGCTTGTTGAAAATACCCCA
GTTGAAGCACTGGGTTTTGCTAGAAAGGTGACTATCTCCAAGGACTCAACAATCATTCTT
GCTGATGATGCGTCAAAGGACGAGATACAGGCTAGGATTTCTCAGCTTAAGAAGGAGTTG
GACATGACCGATTCAATATCCGACTCAGAAAAACTTGCTGAGAGAATTGCCAAGTTGTGT
GGCGGTGTTGCTGTCATAAAGGTTGGAGCTGCAACAGAAGCTGAGCTCGAGGACCGCAAG
CTTCGAATTGAGGATGCGAAACATGCAACTTTTGCTGCAATTGAAGAGGGAATCGTACCT
GGTGGTGGTGCTGCTTTGGTTCATCTGTCAACTTATGTCCATGCCATTAAGGACAATCTT
GAAGATCCAGATGAGAAGTTGGGGGCTGACATTGTGCAGAAGGCATTAGTAGCTCCGGCA
TCTTTGATAGCCCAAAATGCTGGGGTTGAAGGGGAAGTAGTTGTGGAGAAGATAAAGGCA
AGCAAATGGAAGATGGGTTACAATGCAATGACCGACAAGTACGAGAACTTAGTAGAAGCT
GGCATCATTGATCCAGCCATGGTAACAAGATGTGCCTTGCAGAATGCAGCTTCAGTTGCA
GGAGTTGTACTCACTACGCAAGCCATTGTTGTGGACAAGCACACGCCTAAAGCACCTGCA
TTTGCTCCTCCACAAGGACTTCCCATGTAA

Peptide Sequence

PEP ID

XP_016503051.1
PEP Infomation

PREDICTED: ruBisCO large subunit-binding protein subunit alpha-like [Nicotiana tabacum]
Sequence

MASANTISTGSIISFSSKQVGLKGTRVNQLQGQKFNNNKASKSRLVVRANAKEIAYDQKS
RSALQAGIDKLVDVVGLTLGPKGRNVVLDDYDTPKVVNDGVTIARAIELPDAMENAGAAL
IREVASLTNDSAGDGTTTASVLAREIIKRGLLSVTSGANPVSLKKGIDKTVNVLIEMLER
RARPVKGRDDIKAIASISAGNDDDIGTMIADAIDKVGPDGVLTIESSSSFETTVHVEEGM
EIDKGYISPQFMTNQEKLIVEFENARVLVTDQEISAIKDIMPLLEKSTELRAPLLIIAGD
VTGEALATLVVNKLRGVLNVAAIRAPGFGQRRKALLQDIAIVTGAEYQATELGMLVENTP
VEALGFARKVTISKDSTIILADDASKDEIQARISQLKKELDMTDSISDSEKLAERIAKLC
GGVAVIKVGAATEAELEDRKLRIEDAKHATFAAIEEGIVPGGGAALVHLSTYVHAIKDNL
EDPDEKLGADIVQKALVAPASLIAQNAGVEGEVVVEKIKASKWKMGYNAMTDKYENLVEA
GIIDPAMVTRCALQNAASVAGVVLTTQAIVVDKHTPKAPAFAPPQGLPM

Transcript Sequence

Gene sequence data has not been registered.